BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D11LP1|AL429395
(999 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1032 1937 0.0
>3x_Contig1032
Length = 3920
Score = 1937 bits (976), Expect = 0.0
Identities = 995/1000 (99%), Gaps = 2/1000 (0%)
Strand = Plus / Plus
Query: 1 gatcgttgaccaactccactttaccagccttcacgtctgcygctagcgc-cggcagcctg 59
|||||||||||||||||||||||||||||||||||||||| |||||||| | ||||| ||
Sbjct: 349 gatcgttgaccaactccactttaccagccttcacgtctgctgctagcgcactgcagc-tg 407
Query: 60 cttccttcttttcacctgtgctggggccccggtattcacgagcgaacatgtaagccgtcg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 cttccttcttttcacctgtgctggggccccggtattcacgagcgaacatgtaagccgtcg 467
Query: 120 tggctcccgtgttcaagctgctgccaccatgtgacttaaagtcagctggtgcgtgtttgt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tggctcccgtgttcaagctgctgccaccatgtgacttaaagtcagctggtgcgtgtttgt 527
Query: 180 tcttgttgtatacttcaaaagcgtcaaagaatcgtgacatgttgattggttgtattgatg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tcttgttgtatacttcaaaagcgtcaaagaatcgtgacatgttgattggttgtattgatg 587
Query: 240 atcttagttgtggtttgcactataactgagctctacaaatctatacataccatgggctta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 atcttagttgtggtttgcactataactgagctctacaaatctatacataccatgggctta 647
Query: 300 ctcatctattctcacttcgctgccctcttatatatagtcttgacccccatcttggcctag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ctcatctattctcacttcgctgccctcttatatatagtcttgacccccatcttggcctag 707
Query: 360 acccagatcagagatcatgcctttgcctccctggtcatgtaatcacttgttactaatcat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 acccagatcagagatcatgcctttgcctccctggtcatgtaatcacttgttactaatcat 767
Query: 420 tttagcctttcaaagggtatatgtcattgtacccttaatttaaagcttactactgatcaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 tttagcctttcaaagggtatatgtcattgtacccttaatttaaagcttactactgatcaa 827
Query: 480 gacattggagagataagcaattgaattatcgtattgactacttgtcccctggtattcttg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gacattggagagataagcaattgaattatcgtattgactacttgtcccctggtattcttg 887
Query: 540 tatccttgttatcccagtgttacgggaaattaatcaaggagtcgggatatagagggcgaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 tatccttgttatcccagtgttacgggaaattaatcaaggagtcgggatatagagggcgaa 947
Query: 600 acactcctcttttaccccacttagctagcctcagtgtgtctcctttatcccaatattaaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 acactcctcttttaccccacttagctagcctcagtgtgtctcctttatcccaatattaaa 1007
Query: 660 gccttttgctattagactcagtgtctggaaacaagatatcaccaaattggggacagagac 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 gccttttgctattagactcagtgtctggaaacaagatatcaccaaattggggacagagac 1067
Query: 720 caaatacaaccagcacacgtgaatcttagctaagccttaggggtacagaagggaagtcga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 caaatacaaccagcacacgtgaatcttagctaagccttaggggtacagaagggaagtcga 1127
Query: 780 attattagctctaagacccgatgtccgaactgacgtgtttcgttgttgatgttggttctc 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 attattagctctaagacccgatgtccgaactgacgtgtttcgttgttgatgttggttctc 1187
Query: 840 ttagtggtgaccaatggttaaaggcttttacatatgtggaatatgtactgttgaacaaag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 ttagtggtgaccaatggttaaaggcttttacatatgtggaatatgtactgttgaacaaag 1247
Query: 900 ttcaatctcagagaaagacagattacgtgcaattaaatctagttaatgtgtcatccagcg 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 ttcaatctcagagaaagacagattacgtgcaattaaatctagttaatgtgtcatccagcg 1307
Query: 960 atgagtcgttgcccgtgaatwatatggccatgttgcccgt 999
|||||||||||||||||||| |||||||||||||||||||
Sbjct: 1308 atgagtcgttgcccgtgaataatatggccatgttgcccgt 1347
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5580
Number of Sequences: 1807
Number of extensions: 5580
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 999
length of database: 10,358,551
effective HSP length: 16
effective length of query: 983
effective length of database: 10,329,639
effective search space: 10154035137
effective search space used: 10154035137
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)